Files
seaweedfs/weed/shell/command_volume_fsck.go
Chris Lu e725eb4079 refactor(shell): run volume.fsck purge once per volume, after all replicas (#9159)
* refactor(shell): run volume.fsck purge once per volume, after all replicas

The purge step in findExtraChunksInVolumeServers was nested inside the
outer `for dataNodeId` loop, so it fired once per data-node iteration
rather than once total. Two consequences:

1. The replica-intersection safety net was broken. The code marks a fid
   "found in all replicas" only after every replica has reported its
   orphans, but the purge ran after the first data node already, so
   fids contributed only by later replicas never got the `true` flag
   in time. Without `-forcePurging` that meant some legitimate orphans
   were never purged; with `-forcePurging` the flag was ignored so the
   bug was hidden.

2. Visible output got noisy: "purging orphan data for volume X..."
   printed 2-3 times per volume (N_datanodes * N_replicas RPCs to the
   same locations) since purgeFileIdsForOneVolume already fans out to
   every replica location via MasterClient.GetLocations.

Split the work into two explicit phases: collect orphans from every
replica first, then purge each volume once. Drop the per-replica loop
around purgeFileIdsForOneVolume since it already handles all replicas
internally. Keep the per-replica mark-writable loop (each replica's
readonly bit has to be flipped before the purge RPC fans out to it).

Also simplify the gating expression — `isSeveralReplicas &&
foundInAllReplicas` is redundant given the preceding `!isSeveralReplicas`
branch — and replace `!(X > 0)` with the more idiomatic `len(X) == 0`.

Related to #9116 follow-up on multiple fsck passes needed to fully
clean a volume.

* address review: per-replica readonly tracking, count-based intersection, defer-per-volume

Three issues raised on the v1:

1. The readonly cleanup stored a single isReadOnlyReplicas[volumeId]=bool
   that flipped true if any replica was read-only, then the defer marked
   every replica in serverReplicas[volumeId] read-only on exit. If a
   volume had mixed replica modes (one RO, one RW), the originally-RW
   replica ended up RO after fsck returned. Track read-only state per
   replica in readOnlyServerReplicas[volumeId] and revert only those.

2. The defer inside the volumeId loop accumulated for the entire fsck
   run, so every volume we processed stayed writable until the whole
   command returned. Split the per-volume logic into purgeOneVolume so
   the defers unwind between volumes.

3. The intersection logic used a sticky bool that treated "seen on any
   2 of 3 replicas" as "seen on all replicas" — a 3+-replica volume
   would get purged for fids only 2 replicas agreed on, which is what
   -forcePurging is supposed to opt into. Switch to a count-based
   map[fid]int compared against volumeReplicaCounts[volumeId], so we
   only purge without -forcePurging when every replica agrees.

Also drop the now-unused serverReplicas map.
2026-04-20 15:32:47 -07:00

882 lines
31 KiB
Go

package shell
import (
"bufio"
"bytes"
"context"
"errors"
"flag"
"fmt"
"io"
"math"
"net/http"
"net/url"
"os"
"path"
"path/filepath"
"sort"
"strconv"
"strings"
"sync"
"sync/atomic"
"time"
"github.com/seaweedfs/seaweedfs/weed/filer"
"github.com/seaweedfs/seaweedfs/weed/operation"
"github.com/seaweedfs/seaweedfs/weed/pb"
"github.com/seaweedfs/seaweedfs/weed/pb/filer_pb"
"github.com/seaweedfs/seaweedfs/weed/pb/master_pb"
"github.com/seaweedfs/seaweedfs/weed/pb/volume_server_pb"
"github.com/seaweedfs/seaweedfs/weed/security"
"github.com/seaweedfs/seaweedfs/weed/storage"
"github.com/seaweedfs/seaweedfs/weed/storage/needle"
"github.com/seaweedfs/seaweedfs/weed/storage/needle_map"
"github.com/seaweedfs/seaweedfs/weed/storage/types"
"github.com/seaweedfs/seaweedfs/weed/util"
util_http "github.com/seaweedfs/seaweedfs/weed/util/http"
"golang.org/x/sync/errgroup"
)
func init() {
Commands = append(Commands, &commandVolumeFsck{})
}
const (
readbufferSize = 16
jwtFilerTokenExpirationSeconds = 300
)
type commandVolumeFsck struct {
env *CommandEnv
writer io.Writer
bucketsPath string
collection *string
volumeIds map[uint32]bool
tempFolder string
verbose *bool
forcePurging *bool
skipEcVolumes *bool
findMissingChunksInFiler *bool
verifyNeedle *bool
filerSigningKey string
unresolvedManifestEntries atomic.Int64
}
func (c *commandVolumeFsck) Name() string {
return "volume.fsck"
}
func (c *commandVolumeFsck) Help() string {
return `check all volumes to find entries not used by the filer. It is optional and resource intensive.
Important assumption!!!
the system is all used by one filer.
This command works this way:
1. collect all file ids from all volumes, as set A
2. collect all file ids from the filer, as set B
3. find out the set A subtract B
If -findMissingChunksInFiler is enabled, this works
in a reverse way:
1. collect all file ids from all volumes, as set A
2. collect all file ids from the filer, as set B
3. find out the set B subtract A
-cutoffTimeAgo is used to only check chunks older than the cutoff time.
This is important because:
Chunks are uploaded to volume servers before metadata is committed to filer.
A newly uploaded chunk may appear as orphan if metadata commit is still pending.
The default 5h cutoff provides sufficient buffer for metadata commits.
`
}
func (c *commandVolumeFsck) HasTag(tag CommandTag) bool {
return tag == ResourceHeavy
}
func (c *commandVolumeFsck) Do(args []string, commandEnv *CommandEnv, writer io.Writer) (err error) {
fsckCommand := flag.NewFlagSet(c.Name(), flag.ContinueOnError)
c.verbose = fsckCommand.Bool("v", false, "verbose mode")
c.skipEcVolumes = fsckCommand.Bool("skipEcVolumes", false, "skip erasure coded volumes")
c.findMissingChunksInFiler = fsckCommand.Bool("findMissingChunksInFiler", false, "see \"help volume.fsck\"")
c.collection = fsckCommand.String("collection", "", "the collection name")
volumeIds := fsckCommand.String("volumeId", "", "comma separated the volume id")
applyPurging := fsckCommand.Bool("reallyDeleteFromVolume", false, "<expert only!> after detection, delete missing data from volumes / delete missing file entries from filer. Currently this only works with default filerGroup.")
c.forcePurging = fsckCommand.Bool("forcePurging", false, "delete missing data from volumes in one replica used together with applyPurging")
purgeAbsent := fsckCommand.Bool("reallyDeleteFilerEntries", false, "<expert only!> delete missing file entries from filer if the corresponding volume is missing for any reason, please ensure all still existing/expected volumes are connected! used together with findMissingChunksInFiler")
tempPath := fsckCommand.String("tempPath", path.Join(os.TempDir()), "path for temporary idx files")
cutoffTimeAgo := fsckCommand.Duration("cutoffTimeAgo", 5*time.Hour, "only include entries on volume servers before this cutoff time to check orphan chunks")
modifyTimeAgo := fsckCommand.Duration("modifyTimeAgo", 0, "only include entries after this modify time to check orphan chunks")
c.verifyNeedle = fsckCommand.Bool("verifyNeedles", false, "check needles status from volume server")
if err = fsckCommand.Parse(args); err != nil {
return nil
}
// The command struct is a singleton registered in init(), so any state
// not bound to a flag persists across shell invocations. Reset the
// unresolved-manifest counter so a previous failed run can't permanently
// suppress -reallyDeleteFromVolume in this session.
c.unresolvedManifestEntries.Store(0)
if err = commandEnv.confirmIsLocked(args); err != nil {
return
}
c.volumeIds = make(map[uint32]bool)
if *volumeIds != "" {
for _, volumeIdStr := range strings.Split(*volumeIds, ",") {
volumeIdStr = strings.TrimSpace(volumeIdStr)
if volumeIdInt, err := strconv.ParseUint(volumeIdStr, 10, 32); err == nil {
c.volumeIds[uint32(volumeIdInt)] = true
} else {
return fmt.Errorf("parse volumeId string %s to int: %v", volumeIdStr, err)
}
}
}
c.env = commandEnv
c.writer = writer
c.bucketsPath, err = readFilerBucketsPath(commandEnv)
if err != nil {
return fmt.Errorf("read filer buckets path: %w", err)
}
// create a temp folder
c.tempFolder, err = os.MkdirTemp(*tempPath, "sw_fsck")
if err != nil {
return fmt.Errorf("failed to create temp folder: %w", err)
}
if *c.verbose {
fmt.Fprintf(c.writer, "working directory: %s\n", c.tempFolder)
}
defer os.RemoveAll(c.tempFolder)
c.filerSigningKey = util.GetViper().GetString("jwt.filer_signing.key")
// collect all volume id locations
dataNodeVolumeIdToVInfo, err := c.collectVolumeIds()
if err != nil {
return fmt.Errorf("failed to collect all volume locations: %w", err)
}
// If the operator specified -volumeId, reject unknown ids up front instead
// of silently filtering them out and reporting "no orphan data". A silent
// success on a missing volume looks identical to a clean volume and hides
// typos, already-deleted volumes, and stale scripts.
if len(c.volumeIds) > 0 {
known := make(map[uint32]bool)
for _, vidMap := range dataNodeVolumeIdToVInfo {
for vid := range vidMap {
known[vid] = true
}
}
var missing []uint32
for vid := range c.volumeIds {
if !known[vid] {
missing = append(missing, vid)
}
}
if len(missing) > 0 {
sort.Slice(missing, func(i, j int) bool { return missing[i] < missing[j] })
return fmt.Errorf("volume(s) not found on master: %v", missing)
}
}
var collectCutoffFromAtNs int64 = 0
if cutoffTimeAgo.Seconds() != 0 {
collectCutoffFromAtNs = time.Now().Add(-*cutoffTimeAgo).UnixNano()
}
var collectModifyFromAtNs int64 = 0
if modifyTimeAgo.Seconds() != 0 {
collectModifyFromAtNs = time.Now().Add(-*modifyTimeAgo).UnixNano()
}
// collect each volume file ids
eg, _ := errgroup.WithContext(context.Background())
for _dataNodeId, _volumeIdToVInfo := range dataNodeVolumeIdToVInfo {
dataNodeId, volumeIdToVInfo := _dataNodeId, _volumeIdToVInfo
eg.Go(func() error {
for volumeId, vinfo := range volumeIdToVInfo {
if *c.skipEcVolumes && vinfo.isEcVolume {
delete(volumeIdToVInfo, volumeId)
continue
}
if len(c.volumeIds) > 0 {
if _, ok := c.volumeIds[volumeId]; !ok {
delete(volumeIdToVInfo, volumeId)
continue
}
}
if *c.collection != "" && vinfo.collection != *c.collection {
delete(volumeIdToVInfo, volumeId)
continue
}
err = c.collectOneVolumeFileIds(dataNodeId, volumeId, vinfo)
if err != nil {
return fmt.Errorf("failed to collect file ids from volume %d on %s: %v", volumeId, vinfo.server, err)
}
}
if *c.verbose {
fmt.Fprintf(c.writer, "dn %+v filtred %d volumes and locations.\n", dataNodeId, len(dataNodeVolumeIdToVInfo[dataNodeId]))
}
return nil
})
}
err = eg.Wait()
if err != nil {
fmt.Fprintf(c.writer, "got error: %v", err)
return err
}
if *c.findMissingChunksInFiler {
// collect all filer file ids and paths
if err = c.collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo, *purgeAbsent, collectModifyFromAtNs, collectCutoffFromAtNs); err != nil {
return fmt.Errorf("collectFilerFileIdAndPaths: %w", err)
}
for dataNodeId, volumeIdToVInfo := range dataNodeVolumeIdToVInfo {
// for each volume, check filer file ids
if err = c.findFilerChunksMissingInVolumeServers(volumeIdToVInfo, dataNodeId, *applyPurging || *purgeAbsent); err != nil {
return fmt.Errorf("findFilerChunksMissingInVolumeServers: %w", err)
}
}
} else {
// collect all filer file ids
if err = c.collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo, false, 0, 0); err != nil {
return fmt.Errorf("failed to collect file ids from filer: %w", err)
}
// If any entry's manifest could not be resolved, our in-use fid set
// is missing the sub-chunks behind it. Purging orphans now would
// delete live data referenced only via the unresolved manifest, so
// disable -reallyDeleteFromVolume for this run and tell the operator
// to fix the broken entries first.
applyPurgingEffective := *applyPurging
if unresolved := c.unresolvedManifestEntries.Load(); unresolved > 0 && applyPurgingEffective {
fmt.Fprintf(c.writer, "WARNING: %d entry(ies) had unresolvable chunk manifests; refusing to apply -reallyDeleteFromVolume to avoid deleting live sub-chunks. Fix the entries listed above (e.g. delete or repair them) and re-run.\n",
unresolved)
applyPurgingEffective = false
}
// volume file ids subtract filer file ids
if err = c.findExtraChunksInVolumeServers(dataNodeVolumeIdToVInfo, applyPurgingEffective, uint64(collectModifyFromAtNs), uint64(collectCutoffFromAtNs)); err != nil {
return fmt.Errorf("findExtraChunksInVolumeServers: %w", err)
}
}
return nil
}
func (c *commandVolumeFsck) collectFilerFileIdAndPaths(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, purgeAbsent bool, collectModifyFromAtNs int64, cutoffFromAtNs int64) error {
if *c.verbose {
fmt.Fprintf(c.writer, "checking each file from filer path %s...\n", c.getCollectFilerFilePath())
}
files := make(map[uint32]*os.File)
for _, volumeIdToServer := range dataNodeVolumeIdToVInfo {
for vid := range volumeIdToServer {
if _, ok := files[vid]; ok {
continue
}
dst, openErr := os.OpenFile(getFilerFileIdFile(c.tempFolder, vid), os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0644)
if openErr != nil {
return fmt.Errorf("failed to create file %s: %v", getFilerFileIdFile(c.tempFolder, vid), openErr)
}
files[vid] = dst
}
}
defer func() {
for _, f := range files {
f.Close()
}
}()
return doTraverseBfsAndSaving(c.env, c.writer, c.getCollectFilerFilePath(), false,
func(ctx context.Context, entry *filer_pb.FullEntry, outputChan chan interface{}) (err error) {
if *c.verbose && entry.Entry.IsDirectory {
fmt.Fprintf(c.writer, "checking directory %s\n", util.NewFullPath(entry.Dir, entry.Entry.Name))
}
dataChunks, manifestChunks, resolveErr := filer.ResolveChunkManifest(ctx, filer.LookupFn(c.env), entry.Entry.GetChunks(), 0, math.MaxInt64)
if resolveErr != nil {
// Cancellation/deadline isn't manifest corruption; surface it
// so the BFS bails out cleanly without polluting the
// unresolved-manifest counter (which would otherwise block
// purges and mislead the operator about the failure cause).
if errors.Is(resolveErr, context.Canceled) || errors.Is(resolveErr, context.DeadlineExceeded) {
return resolveErr
}
// A single broken manifest used to abort the whole traversal,
// leaving the operator with no way to identify orphans without
// first fixing the broken file. Instead, record only the
// top-level chunk fids (data chunks plus the manifest needles
// themselves — sub-chunks behind the unreadable manifest are
// unknown), warn, and keep going. The unresolved counter blocks
// any purge step downstream so we never delete a sub-chunk we
// couldn't account for.
fmt.Fprintf(c.writer, "WARNING: ResolveChunkManifest failed for %s: %v — recording top-level chunk fids only; purging will be disabled\n",
util.NewFullPath(entry.Dir, entry.Entry.Name), resolveErr)
c.unresolvedManifestEntries.Add(1)
dataChunks = entry.Entry.GetChunks()
manifestChunks = nil
}
dataChunks = append(dataChunks, manifestChunks...)
for _, chunk := range dataChunks {
if cutoffFromAtNs != 0 && chunk.ModifiedTsNs > cutoffFromAtNs {
continue
}
if collectModifyFromAtNs != 0 && chunk.ModifiedTsNs < collectModifyFromAtNs {
continue
}
select {
case outputChan <- &Item{
vid: chunk.Fid.VolumeId,
fileKey: chunk.Fid.FileKey,
cookie: chunk.Fid.Cookie,
path: util.NewFullPath(entry.Dir, entry.Entry.Name),
}:
case <-ctx.Done():
return ctx.Err()
}
}
return nil
},
func(outputChan chan interface{}) error {
buffer := make([]byte, readbufferSize)
for item := range outputChan {
i := item.(*Item)
if f, ok := files[i.vid]; ok {
util.Uint64toBytes(buffer, i.fileKey)
util.Uint32toBytes(buffer[8:], i.cookie)
util.Uint32toBytes(buffer[12:], uint32(len(i.path)))
if _, err := f.Write(buffer); err != nil {
return err
}
if _, err := f.Write([]byte(i.path)); err != nil {
return err
}
} else if *c.findMissingChunksInFiler {
// check if the volume matches the filter
if len(c.volumeIds) > 0 {
if _, ok := c.volumeIds[i.vid]; !ok {
continue
}
}
fmt.Fprintf(c.writer, "%d,%x%08x %s volume not found\n", i.vid, i.fileKey, i.cookie, i.path)
if purgeAbsent {
fmt.Fprintf(c.writer, "deleting path %s after volume not found\n", i.path)
c.httpDelete(i.path)
}
}
}
return nil
})
}
func (c *commandVolumeFsck) findFilerChunksMissingInVolumeServers(volumeIdToVInfo map[uint32]VInfo, dataNodeId string, applyPurging bool) error {
for volumeId, vinfo := range volumeIdToVInfo {
checkErr := c.oneVolumeFileIdsCheckOneVolume(dataNodeId, volumeId, applyPurging)
if checkErr != nil {
return fmt.Errorf("failed to collect file ids from volume %d on %s: %v", volumeId, vinfo.server, checkErr)
}
}
return nil
}
func (c *commandVolumeFsck) findExtraChunksInVolumeServers(dataNodeVolumeIdToVInfo map[string]map[uint32]VInfo, applyPurging bool, modifyFrom, cutoffFrom uint64) error {
var totalInUseCount, totalOrphanChunkCount, totalOrphanDataSize uint64
// map[volumeId]map[fid]replicaCount — counts how many replicas reported
// this fid as orphan. A fid is safe to purge without -forcePurging only
// when replicaCount == volumeReplicaCounts[volumeId] (i.e. every replica
// agrees it's orphan). The previous bool-based tracking treated "seen on
// any 2 replicas" as "seen on all replicas", which was wrong for
// 3+-replica volumes.
volumeIdOrphanFileIds := make(map[uint32]map[string]int)
volumeReplicaCounts := make(map[uint32]int)
isEcVolumeReplicas := make(map[uint32]bool)
// Track which specific replicas were read-only so we only flip those
// back on exit. The old `isReadOnlyReplicas[volumeId] = bool` leaked
// read-only state across replicas: if one replica was RO and another RW,
// the deferred cleanup would mark the originally-RW replica RO too.
readOnlyServerReplicas := make(map[uint32][]pb.ServerAddress)
// Phase 1: collect orphan fids from every replica of every volume.
// The purge step runs in Phase 2, AFTER every replica has contributed.
// Running purge inside this loop (as the original code did) meant the
// first replica's orphans were deleted before later replicas could
// participate in the intersection — so the "only purge fids seen on
// all replicas" safety net only worked by accident, and purge also
// fired multiple times per volume (once per data-node iteration).
for dataNodeId, volumeIdToVInfo := range dataNodeVolumeIdToVInfo {
for volumeId, vinfo := range volumeIdToVInfo {
inUseCount, orphanFileIds, orphanDataSize, checkErr := c.oneVolumeFileIdsSubtractFilerFileIds(dataNodeId, volumeId, &vinfo, modifyFrom, cutoffFrom)
if checkErr != nil {
return fmt.Errorf("failed to collect file ids from volume %d on %s: %v", volumeId, vinfo.server, checkErr)
}
if _, found := volumeIdOrphanFileIds[volumeId]; !found {
volumeIdOrphanFileIds[volumeId] = make(map[string]int)
}
volumeReplicaCounts[volumeId]++
for _, fid := range orphanFileIds {
volumeIdOrphanFileIds[volumeId][fid]++
}
totalInUseCount += inUseCount
totalOrphanChunkCount += uint64(len(orphanFileIds))
totalOrphanDataSize += orphanDataSize
if *c.verbose {
for _, fid := range orphanFileIds {
fmt.Fprintf(c.writer, "%s:%s\n", vinfo.collection, fid)
}
}
isEcVolumeReplicas[volumeId] = vinfo.isEcVolume
if vinfo.isReadOnly {
readOnlyServerReplicas[volumeId] = append(readOnlyServerReplicas[volumeId], vinfo.server)
}
}
}
// Phase 2: purge. At most one call to purgeFileIdsForOneVolume per
// volume — that helper already fans out to all replica locations via
// MasterClient.GetLocations, so iterating per replica here (as the old
// code did) would issue N*N delete RPCs for N replicas.
if applyPurging {
for volumeId, orphanReplicaFileIds := range volumeIdOrphanFileIds {
if len(orphanReplicaFileIds) == 0 {
continue
}
if isEcVolumeReplicas[volumeId] {
fmt.Fprintf(c.writer, "skip purging for Erasure Coded volume %d.\n", volumeId)
continue
}
// Call out to a closure per volume so the deferred "mark
// readonly again" fires between volumes instead of piling up
// until findExtraChunksInVolumeServers returns.
if err := c.purgeOneVolume(volumeId, orphanReplicaFileIds, volumeReplicaCounts[volumeId], readOnlyServerReplicas[volumeId]); err != nil {
return err
}
}
}
if !applyPurging {
var pct float64
if totalCount := totalOrphanChunkCount + totalInUseCount; totalCount > 0 {
pct = float64(totalOrphanChunkCount) * 100 / (float64(totalCount))
}
fmt.Fprintf(c.writer, "\nTotal\t\tentries:%d\torphan:%d\t%.2f%%\t%dB\n",
totalOrphanChunkCount+totalInUseCount, totalOrphanChunkCount, pct, totalOrphanDataSize)
fmt.Fprintf(c.writer, "This could be normal if multiple filers or no filers are used.\n")
}
if totalOrphanChunkCount == 0 {
fmt.Fprintf(c.writer, "no orphan data\n")
}
return nil
}
// purgeOneVolume picks the orphan fids to delete for a single volume and
// fires the delete RPC. It's split out of findExtraChunksInVolumeServers so
// the `defer markVolumeWritable(..., false, false)` at the bottom fires
// between volumes — putting that defer inside the caller's for-loop would
// leave every processed volume writable until the whole fsck run finished.
func (c *commandVolumeFsck) purgeOneVolume(volumeId uint32, orphanReplicaFileIds map[string]int, replicaCount int, readOnlyReplicas []pb.ServerAddress) error {
orphanFileIds := make([]string, 0, len(orphanReplicaFileIds))
for fid, foundInReplicaCount := range orphanReplicaFileIds {
// Default safety net: only purge fids every replica reported as
// orphan. -forcePurging bypasses this for operators who've already
// decided they're OK with the single-replica evidence.
if foundInReplicaCount == replicaCount || *c.forcePurging {
orphanFileIds = append(orphanFileIds, fid)
}
}
if len(orphanFileIds) == 0 {
return nil
}
if *c.verbose {
fmt.Fprintf(c.writer, "purging process for volume %d.\n", volumeId)
}
needleVID := needle.VolumeId(volumeId)
for _, server := range readOnlyReplicas {
if err := markVolumeWritable(c.env.option.GrpcDialOption, needleVID, server, true, false); err != nil {
return fmt.Errorf("mark volume %d on %v read/write: %v", volumeId, server, err)
}
fmt.Fprintf(c.writer, "temporarily marked %d on server %v writable for forced purge\n", volumeId, server)
defer markVolumeWritable(c.env.option.GrpcDialOption, needleVID, server, false, false)
}
if *c.verbose {
fmt.Fprintf(c.writer, "purging files from volume %d\n", volumeId)
}
if err := c.purgeFileIdsForOneVolume(volumeId, orphanFileIds); err != nil {
return fmt.Errorf("purging volume %d: %v", volumeId, err)
}
return nil
}
func (c *commandVolumeFsck) collectOneVolumeFileIds(dataNodeId string, volumeId uint32, vinfo VInfo) error {
if *c.verbose {
fmt.Fprintf(c.writer, "collecting volume %d file ids from %s ...\n", volumeId, vinfo.server)
}
return operation.WithVolumeServerClient(false, vinfo.server, c.env.option.GrpcDialOption,
func(volumeServerClient volume_server_pb.VolumeServerClient) error {
ext := ".idx"
if vinfo.isEcVolume {
ext = ".ecx"
}
copyFileClient, err := volumeServerClient.CopyFile(context.Background(), &volume_server_pb.CopyFileRequest{
VolumeId: volumeId,
Ext: ext,
CompactionRevision: math.MaxUint32,
StopOffset: math.MaxInt64,
Collection: vinfo.collection,
IsEcVolume: vinfo.isEcVolume,
IgnoreSourceFileNotFound: false,
})
if err != nil {
return fmt.Errorf("failed to start copying volume %d%s: %v", volumeId, ext, err)
}
var buf bytes.Buffer
for {
resp, err := copyFileClient.Recv()
if errors.Is(err, io.EOF) {
break
}
if err != nil {
return err
}
buf.Write(resp.FileContent)
}
idxFilename := getVolumeFileIdFile(c.tempFolder, dataNodeId, volumeId)
err = writeToFile(buf.Bytes(), idxFilename)
if err != nil {
return fmt.Errorf("failed to copy %d%s from %s: %v", volumeId, ext, vinfo.server, err)
}
return nil
})
}
type Item struct {
vid uint32
fileKey uint64
cookie uint32
path util.FullPath
}
func (c *commandVolumeFsck) readFilerFileIdFile(volumeId uint32, fn func(needleId types.NeedleId, itemPath util.FullPath)) error {
fp, err := os.Open(getFilerFileIdFile(c.tempFolder, volumeId))
if err != nil {
return err
}
defer fp.Close()
br := bufio.NewReader(fp)
buffer := make([]byte, readbufferSize)
var readSize int
var readErr error
item := &Item{vid: volumeId}
for {
readSize, readErr = io.ReadFull(br, buffer)
if errors.Is(readErr, io.EOF) {
break
}
if readErr != nil {
return fmt.Errorf("read fid header for volume %d: %w", volumeId, readErr)
}
if readSize != readbufferSize {
return fmt.Errorf("read fid header size mismatch for volume %d: got %d want %d", volumeId, readSize, readbufferSize)
}
item.fileKey = util.BytesToUint64(buffer[:8])
item.cookie = util.BytesToUint32(buffer[8:12])
pathSize := util.BytesToUint32(buffer[12:16])
pathBytes := make([]byte, int(pathSize))
n, err := io.ReadFull(br, pathBytes)
if err != nil {
return fmt.Errorf("read fid path for volume %d,%x%08x: %w", volumeId, item.fileKey, item.cookie, err)
}
if n != int(pathSize) {
return fmt.Errorf("read fid path size mismatch for volume %d,%x%08x: got %d want %d", volumeId, item.fileKey, item.cookie, n, pathSize)
}
item.path = util.FullPath(pathBytes)
needleId := types.NeedleId(item.fileKey)
fn(needleId, item.path)
}
return nil
}
func (c *commandVolumeFsck) oneVolumeFileIdsCheckOneVolume(dataNodeId string, volumeId uint32, applyPurging bool) (err error) {
if *c.verbose {
fmt.Fprintf(c.writer, "find missing file chunks in dataNodeId %s volume %d ...\n", dataNodeId, volumeId)
}
db := needle_map.NewMemDb()
defer db.Close()
if err = db.LoadFromIdx(getVolumeFileIdFile(c.tempFolder, dataNodeId, volumeId)); err != nil {
return
}
if err = c.readFilerFileIdFile(volumeId, func(needleId types.NeedleId, itemPath util.FullPath) {
if _, found := db.Get(needleId); !found {
fmt.Fprintf(c.writer, "%s\n", itemPath)
if applyPurging {
c.httpDelete(itemPath)
}
}
}); err != nil {
return
}
return nil
}
func (c *commandVolumeFsck) httpDelete(path util.FullPath) {
req, err := http.NewRequest(http.MethodDelete, "", nil)
if err != nil {
fmt.Fprintf(c.writer, "HTTP delete request error: %v\n", err)
return
}
req.URL = &url.URL{
Scheme: "http",
Host: c.env.option.FilerAddress.ToHttpAddress(),
Path: string(path),
}
if c.filerSigningKey != "" {
encodedJwt := security.GenJwtForFilerServer(security.SigningKey(c.filerSigningKey), jwtFilerTokenExpirationSeconds)
req.Header.Set("Authorization", "BEARER "+string(encodedJwt))
}
if *c.verbose {
fmt.Fprintf(c.writer, "full HTTP delete request to be sent: %v\n", req)
}
resp, err := util_http.GetGlobalHttpClient().Do(req)
if err != nil {
fmt.Fprintf(c.writer, "DELETE fetch error: %v\n", err)
return
}
defer resp.Body.Close()
_, err = io.ReadAll(resp.Body)
if err != nil {
fmt.Fprintf(c.writer, "DELETE response error: %v\n", err)
}
if *c.verbose {
fmt.Fprintln(c.writer, "delete response Status : ", resp.Status)
fmt.Fprintln(c.writer, "delete response Headers : ", resp.Header)
}
}
func (c *commandVolumeFsck) oneVolumeFileIdsSubtractFilerFileIds(dataNodeId string, volumeId uint32, vinfo *VInfo, modifyFrom, cutoffFrom uint64) (inUseCount uint64, orphanFileIds []string, orphanDataSize uint64, err error) {
volumeFileIdDb := needle_map.NewMemDb()
defer volumeFileIdDb.Close()
if err = volumeFileIdDb.LoadFromIdx(getVolumeFileIdFile(c.tempFolder, dataNodeId, volumeId)); err != nil {
err = fmt.Errorf("failed to LoadFromIdx %+v", err)
return
}
if err = c.readFilerFileIdFile(volumeId, func(filerNeedleId types.NeedleId, itemPath util.FullPath) {
inUseCount++
if *c.verifyNeedle && !vinfo.isEcVolume {
if needleValue, ok := volumeFileIdDb.Get(filerNeedleId); ok && !needleValue.Size.IsDeleted() {
if _, err := readNeedleStatus(c.env.option.GrpcDialOption, vinfo.server, volumeId, *needleValue); err != nil {
// files may be deleted during copying filesIds
if !strings.Contains(err.Error(), storage.ErrorDeleted.Error()) {
fmt.Fprintf(c.writer, "failed to read %d:%s needle status of file %s: %+v\n",
volumeId, filerNeedleId.String(), itemPath, err)
if *c.forcePurging {
return
}
}
}
}
}
if err = volumeFileIdDb.Delete(filerNeedleId); err != nil && *c.verbose {
fmt.Fprintf(c.writer, "failed to nm.delete %s(%+v): %+v", itemPath, filerNeedleId, err)
}
}); err != nil {
err = fmt.Errorf("failed to readFilerFileIdFile %+v", err)
return
}
var orphanFileCount uint64
if err = volumeFileIdDb.AscendingVisit(func(n needle_map.NeedleValue) error {
if n.Size.IsDeleted() {
return nil
}
if !vinfo.isEcVolume && (cutoffFrom > 0 || modifyFrom > 0) {
return operation.WithVolumeServerClient(false, vinfo.server, c.env.option.GrpcDialOption,
func(volumeServerClient volume_server_pb.VolumeServerClient) error {
resp, err := volumeServerClient.ReadNeedleMeta(context.Background(), &volume_server_pb.ReadNeedleMetaRequest{
VolumeId: volumeId,
NeedleId: types.NeedleIdToUint64(n.Key),
Offset: n.Offset.ToActualOffset(),
Size: int32(n.Size),
})
if err != nil {
return fmt.Errorf("read needle meta with id %d from volume %d: %v", n.Key, volumeId, err)
}
if (modifyFrom == 0 || modifyFrom <= resp.AppendAtNs) && (cutoffFrom == 0 || resp.AppendAtNs <= cutoffFrom) {
orphanFileIds = append(orphanFileIds, n.Key.FileId(volumeId))
orphanFileCount++
orphanDataSize += uint64(n.Size)
}
return nil
})
} else {
if vinfo.isEcVolume && (cutoffFrom > 0 || modifyFrom > 0) {
if *c.verbose {
fmt.Fprintf(c.writer, "skipping time-based filtering for EC volume %d (cutoffFrom=%d, modifyFrom=%d)\n", volumeId, cutoffFrom, modifyFrom)
}
}
orphanFileIds = append(orphanFileIds, n.Key.FileId(volumeId))
orphanFileCount++
orphanDataSize += uint64(n.Size)
}
return nil
}); err != nil {
err = fmt.Errorf("failed to AscendingVisit %+v", err)
return
}
if orphanFileCount > 0 {
pct := float64(orphanFileCount*100) / (float64(orphanFileCount + inUseCount))
fmt.Fprintf(c.writer, "dataNode:%s\tvolume:%d\tentries:%d\torphan:%d\t%.2f%%\t%dB\n",
dataNodeId, volumeId, orphanFileCount+inUseCount, orphanFileCount, pct, orphanDataSize)
}
return
}
type VInfo struct {
server pb.ServerAddress
collection string
isEcVolume bool
isReadOnly bool
}
func (c *commandVolumeFsck) collectVolumeIds() (volumeIdToServer map[string]map[uint32]VInfo, err error) {
if *c.verbose {
fmt.Fprintf(c.writer, "collecting volume id and locations from master ...\n")
}
volumeIdToServer = make(map[string]map[uint32]VInfo)
// collect topology information
topologyInfo, _, err := collectTopologyInfo(c.env, 0)
if err != nil {
return
}
eachDataNode(topologyInfo, func(dc DataCenterId, rack RackId, t *master_pb.DataNodeInfo) {
var volumeCount, ecShardCount int
dataNodeId := t.GetId()
for _, diskInfo := range t.DiskInfos {
if _, ok := volumeIdToServer[dataNodeId]; !ok {
volumeIdToServer[dataNodeId] = make(map[uint32]VInfo)
}
for _, vi := range diskInfo.VolumeInfos {
volumeIdToServer[dataNodeId][vi.Id] = VInfo{
server: pb.NewServerAddressFromDataNode(t),
collection: vi.Collection,
isEcVolume: false,
isReadOnly: vi.ReadOnly,
}
volumeCount += 1
}
for _, ecShardInfo := range diskInfo.EcShardInfos {
volumeIdToServer[dataNodeId][ecShardInfo.Id] = VInfo{
server: pb.NewServerAddressFromDataNode(t),
collection: ecShardInfo.Collection,
isEcVolume: true,
isReadOnly: true,
}
ecShardCount += 1
}
}
if *c.verbose {
fmt.Fprintf(c.writer, "dn %+v collected %d volumes and %d ec shards.\n", dataNodeId, volumeCount, ecShardCount)
}
})
return
}
func (c *commandVolumeFsck) purgeFileIdsForOneVolume(volumeId uint32, fileIds []string) (err error) {
fmt.Fprintf(c.writer, "purging orphan data for volume %d...\n", volumeId)
locations, found := c.env.MasterClient.GetLocations(volumeId)
if !found {
return fmt.Errorf("failed to find volume %d locations", volumeId)
}
resultChan := make(chan []*volume_server_pb.DeleteResult, len(locations))
var wg sync.WaitGroup
for _, location := range locations {
wg.Add(1)
go func(server pb.ServerAddress, fidList []string) {
defer wg.Done()
deleteResults := operation.DeleteFileIdsAtOneVolumeServer(server, c.env.option.GrpcDialOption, fidList, false)
if deleteResults != nil {
resultChan <- deleteResults
}
}(location.ServerAddress(), fileIds)
}
wg.Wait()
close(resultChan)
for results := range resultChan {
for _, result := range results {
if result.Error != "" {
fmt.Fprintf(c.writer, "purge error: %s\n", result.Error)
}
}
}
return
}
func (c *commandVolumeFsck) getCollectFilerFilePath() string {
if *c.collection != "" {
return fmt.Sprintf("%s/%s", c.bucketsPath, *c.collection)
}
return "/"
}
func getVolumeFileIdFile(tempFolder string, dataNodeid string, vid uint32) string {
return filepath.Join(tempFolder, fmt.Sprintf("%s_%d.idx", dataNodeid, vid))
}
func getFilerFileIdFile(tempFolder string, vid uint32) string {
return filepath.Join(tempFolder, fmt.Sprintf("%d.fid", vid))
}
func writeToFile(bytes []byte, fileName string) error {
flags := os.O_WRONLY | os.O_CREATE | os.O_TRUNC
dst, err := os.OpenFile(fileName, flags, 0644)
if err != nil {
return err
}
defer dst.Close()
_, err = dst.Write(bytes)
return err
}