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scylladb/sstables/streaming_histogram.hh
Pekka Enberg 38a54df863 Fix pre-ScyllaDB copyright statements
People keep tripping over the old copyrights and copy-pasting them to
new files. Search and replace "Cloudius Systems" with "ScyllaDB".

Message-Id: <1460013664-25966-1-git-send-email-penberg@scylladb.com>
2016-04-08 08:12:47 +03:00

250 lines
7.6 KiB
C++

/*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
/*
* Copyright (C) 2015 ScyllaDB
*
* Modified by ScyllaDB
*/
/*
* This file is part of Scylla.
*
* Scylla is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* Scylla is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Scylla. If not, see <http://www.gnu.org/licenses/>.
*/
#pragma once
#include "disk_types.hh"
namespace sstables {
/**
* Histogram that can be constructed from streaming of data.
*
* The algorithm is taken from following paper:
* Yael Ben-Haim and Elad Tom-Tov, "A Streaming Parallel Decision Tree Algorithm" (2010)
* http://jmlr.csail.mit.edu/papers/volume11/ben-haim10a/ben-haim10a.pdf
*/
struct streaming_histogram {
// TreeMap to hold bins of histogram.
disk_hash<uint32_t, double, uint64_t> bin;
// maximum bin size for this histogram
uint32_t max_bin_size;
/**
* Creates a new histogram with max bin size of maxBinSize
* @param maxBinSize maximum number of bins this histogram can have
*/
streaming_histogram(int max_bin_size_p = 0) {
max_bin_size = max_bin_size_p;
}
streaming_histogram(int max_bin_size_p, disk_hash<uint32_t, double, uint64_t>&& bin_p)
{
max_bin_size = max_bin_size_p;
bin = std::move(bin_p);
}
/**
* Adds new point p to this histogram.
* @param p
*/
void update(double p)
{
update(p, 1);
}
/**
* Adds new point p with value m to this histogram.
* @param p
* @param m
*/
void update(double p, uint64_t m) {
auto it = bin.map.find(p);
if (it != bin.map.end()) {
bin.map[p] = it->second + m;
} else {
bin.map[p] = m;
// if bin size exceeds maximum bin size then trim down to max size
while (bin.map.size() > max_bin_size) {
// find points p1, p2 which have smallest difference
auto it = bin.map.begin();
double p1 = it->first;
it++;
double p2 = it->first;
it++;
double smallestDiff = p2 - p1;
double q1 = p1, q2 = p2;
while(it != bin.map.end()) {
p1 = p2;
p2 = it->first;
it++;
double diff = p2 - p1;
if (diff < smallestDiff)
{
smallestDiff = diff;
q1 = p1;
q2 = p2;
}
}
// merge those two
uint64_t k1 = bin.map.erase(q1);
uint64_t k2 = bin.map.erase(q2);
bin.map.insert({(q1 * k1 + q2 * k2) / (k1 + k2), k1 + k2});
}
}
}
/**
* Merges given histogram with this histogram.
*
* @param other histogram to merge
*/
void merge(streaming_histogram& other)
{
if (!other.bin.map.size())
return;
for (auto& it : other.bin.map) {
update(it.first, it.second);
}
}
/**
* Function used to describe the type.
*/
template <typename Describer>
auto describe_type(Describer f) { return f(max_bin_size, bin); }
// FIXME: convert Java code below.
#if 0
/**
* Calculates estimated number of points in interval [-inf,b].
*
* @param b upper bound of a interval to calculate sum
* @return estimated number of points in a interval [-inf,b].
*/
public double sum(double b)
{
double sum = 0;
// find the points pi, pnext which satisfy pi <= b < pnext
Map.Entry<Double, Long> pnext = bin.higherEntry(b);
if (pnext == null)
{
// if b is greater than any key in this histogram,
// just count all appearance and return
for (Long value : bin.values())
sum += value;
}
else
{
Map.Entry<Double, Long> pi = bin.floorEntry(b);
if (pi == null)
return 0;
// calculate estimated count mb for point b
double weight = (b - pi.getKey()) / (pnext.getKey() - pi.getKey());
double mb = pi.getValue() + (pnext.getValue() - pi.getValue()) * weight;
sum += (pi.getValue() + mb) * weight / 2;
sum += pi.getValue() / 2.0;
for (Long value : bin.headMap(pi.getKey(), false).values())
sum += value;
}
return sum;
}
public Map<Double, Long> getAsMap()
{
return Collections.unmodifiableMap(bin);
}
public static class StreamingHistogramSerializer implements ISerializer<StreamingHistogram>
{
public void serialize(StreamingHistogram histogram, DataOutputPlus out) throws IOException
{
out.writeInt(histogram.maxBinSize);
Map<Double, Long> entries = histogram.getAsMap();
out.writeInt(entries.size());
for (Map.Entry<Double, Long> entry : entries.entrySet())
{
out.writeDouble(entry.getKey());
out.writeLong(entry.getValue());
}
}
public StreamingHistogram deserialize(DataInput in) throws IOException
{
int maxBinSize = in.readInt();
int size = in.readInt();
Map<Double, Long> tmp = new HashMap<>(size);
for (int i = 0; i < size; i++)
{
tmp.put(in.readDouble(), in.readLong());
}
return new StreamingHistogram(maxBinSize, tmp);
}
public long serializedSize(StreamingHistogram histogram, TypeSizes typeSizes)
{
long size = typeSizes.sizeof(histogram.maxBinSize);
Map<Double, Long> entries = histogram.getAsMap();
size += typeSizes.sizeof(entries.size());
// size of entries = size * (8(double) + 8(long))
size += entries.size() * (8 + 8);
return size;
}
}
@Override
public boolean equals(Object o)
{
if (this == o)
return true;
if (!(o instanceof StreamingHistogram))
return false;
StreamingHistogram that = (StreamingHistogram) o;
return maxBinSize == that.maxBinSize && bin.equals(that.bin);
}
@Override
public int hashCode()
{
return Objects.hashCode(bin.hashCode(), maxBinSize);
}
#endif
};
}