Commit Graph

11057 Commits

Author SHA1 Message Date
Avi Kivity
339cc0c2fa main: verify sufficient memory per shard
Refuse to boot if we don't have at least 1 GiB per shard, unless in developer
mode.

The primary violator here is docker, but since it starts in developer mode,
it won't get fixed.  We need some extra logic for this case.
Message-Id: <20161221090222.28677-1-avi@scylladb.com>
2016-12-27 12:05:52 +02:00
Avi Kivity
868b4d110c Merge "Fixes for intentional short reads" from Paweł
"This patchset contains fixes for the changes introduced in "Query result
size limiting". It also improves handling of short data reads.

I order to minimise chances of digest mismatch during data queries replicas
that were asked just to return a digest also keep track of the size of the
data (in the IDL representation) so that they would stop at the same point
nodes doing full data queries would. Moreover, data queries are not
affected by per-shard memory limit and the coordinator sends individual
result size limits to replicas in order not to depend on hardcoded values.

It is still possible to get digest mismatches if the IDL changes (e.g. a
new field is added), but, hopefully, that won't be a serious problem."

* 'pdziepak/short-read-fixes/v4' of github.com:cloudius-systems/seastar-dev:
  query: introduce result_memory_accounter::foreign_state
  storage_proxy: fix short reads in parallel range queries
  storage_proxy: pass maximum result size to replicas
  mutation_partition: use result limiter for digest reads
  query: make result_memory_limiter constants available for linker
  result_memory_limiter: add accounter for digest reads
  idl: allow writers to use any output stream
  result_memory_limiter: split new_read() to new_{data, mutation}_read()
  idl: is_short_read() was added in 1.6
  mutation_partition: honour allowed_short_read for static rows
  storage_proxy: fix _is_short_read computation
  storage_proxy: disallow short reads if got no live rows
  storage_proxy: don't stop after result with no live rows
2016-12-26 10:42:49 +02:00
Avi Kivity
1d9ee358f1 Revert "Merge "Reduce the size of mutation_partition" from Piotr"
This reverts commit aa392810ff, reversing
changes made to a24ff47c637e6a5fd158099b8a65f1191fc2d023; it uses
boost::intrusive::detail directly, which it must not, and doesn't compile on
all boost versions as a consequence.
2016-12-25 16:07:48 +02:00
Avi Kivity
59d389bd46 Merge seastar upstream
* seastar 0b98024...f32e4c2 (11):
  > Merge "Moving the reactor counters to the metric layer" from Amnon
  > metrics: Metrics function should take variable as a refernce
  > Revert "Merge ""Moving the reactor counters to the metric layer from Amnon"
  > Merge ""Moving the reactor counters to the metric layer from Amnon
  > Revert "fstream: Auto-close data_sink and data_source"
  > rpc: Avoid resource unit leaks on failure
  > fstream: Auto-close data_sink and data_source
  > http: Move metrics registration to the metrics layer
  > output_stream: add batching to zero copy interface
  > Revert "slab: Move the metrics registration to the metrics layer"
  > slab: Move the metrics registration to the metrics layer
2016-12-25 15:50:09 +02:00
Amnon Heiman
70b2a1bfd4 Set the prometheus prefix to scylla
This patch make the prometheus prefix configurable and set the default
value to scylla.

Fixes #1964

Signed-off-by: Amnon Heiman <amnon@scylladb.com>
Message-Id: <1482671970-21487-1-git-send-email-amnon@scylladb.com>
2016-12-25 15:21:53 +02:00
Avi Kivity
b99a0fc076 licenses: clarify that licenses in this directory do not cover entire work 2016-12-25 12:59:38 +02:00
Avi Kivity
aa392810ff Merge "Reduce the size of mutation_partition" from Piotr
"Reduce the size of mutation_partition by implementing intrusive set using
bi::rbtree_algorithms directly and using tree nodes optimized for size.

This will reduce the size of mutation_partition by:
24 bytes + <number of cql rows> * 8 bytes

This should have a positive impact on performance because mutation_partitions
are stored both in memtable and cache.

Fixes #742."

* 'haaawk/742' of github.com:cloudius-systems/seastar-dev:
  intrusive_set: rename size() to calculate_size()
  Make intrusive_set_external_comparator::_value_traits static
  Implement intrusive set using rbtree_algorithms
  mutation_partition: make apply_reversibly_intrusive_set nongeneric
  mutation_partition: take schema in find_row and clustered_row
  mutation_partition: Extract intrusive set logic to a class.
  mutation_partition: Replace value_comp with key_comp calls
2016-12-25 12:56:10 +02:00
Benoît Canet
a24ff47c63 scylla_setup: Use blkid or ls to list potentials block devices
blkid does not list root raw device.

Revert to lsblk while taking care of having a fallback
path in case the -p option is not supported.

Fixes #1963.

Suggested-by: Avi Kivity <avi@scylladb.com>
Signed-off-by: Benoît Canet <benoit@scylladb.com>
Message-Id: <20161225100204.13297-1-benoit@scylladb.com>
2016-12-25 12:03:40 +02:00
Takuya ASADA
f3e45bc9ef dist/redhat: don't try to adduser when user is already exists
Currently we get "failed adding user 'scylla'" on .rpm installation when user is already exists, we can skip it to prevent error.

Fixes #1958

Signed-off-by: Takuya ASADA <syuu@scylladb.com>
Message-Id: <1482550075-27939-1-git-send-email-syuu@scylladb.com>
2016-12-25 11:37:25 +02:00
Piotr Jastrzebski
345ed5b6ff intrusive_set: rename size() to calculate_size()
This hopefully will make it more apparent that
the time complexity of this method is O(N) not O(1).

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:32:13 +01:00
Piotr Jastrzebski
151fa3aaf0 Make intrusive_set_external_comparator::_value_traits static
_value_traits can be shared among all instances
and there's no need to store it in every single one.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:32:13 +01:00
Piotr Jastrzebski
671affc36c Implement intrusive set using rbtree_algorithms
This new implementation takes less memory because it
does not store comparator.

It also uses tree nodes optimized for size. This means
that instead of storing an enum field |color| they embed
this information inside pointer to parent.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:32:13 +01:00
Piotr Jastrzebski
b0f712a4e8 mutation_partition: make apply_reversibly_intrusive_set nongeneric
apply_reversibly_intrusive_set is used only in one place
and always with rows_type. There's no need for it to be generic.
This will allow changing intrusive set implementation.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:29:07 +01:00
Piotr Jastrzebski
2af6ff68d9 mutation_partition: take schema in find_row and clustered_row
This will allow intrusive set implementation that does not
store schema.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:29:07 +01:00
Piotr Jastrzebski
b3b924dec9 mutation_partition: Extract intrusive set logic to a class.
It will make it easier to change the implementation
of the intrusive set.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:29:07 +01:00
Piotr Jastrzebski
ac7481f4b2 mutation_partition: Replace value_comp with key_comp calls
This will reduce the size of bi::set API being used.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
2016-12-23 11:29:07 +01:00
Tomasz Grabiec
f2a63270d1 sstables: Fix double close on index and data files when writing fails
file output streams take the responsibility of closing the file, they
will close the file as part of closing the stream.

During sstable writing we create sstable object and keep file
references there as well. Sstable object also has responsibility for
closing the files, and does so from sstable::~sstable().

Double close was supposed to be avoided by a construct like this:

  writer.close().get();
  _file = {};

However if close() failed, which can happen when write-ahead failed,
_file would not be cleared, and both the writer and sstable would
close the file. This will result in a crash in
append_challenged_posix_file_impl::close(), which is not prepared to
be closed twice.

Another problem is that if exception happened before we reached that
construct, we still should close the writer. Currently we don't, so
there's no double close on the file, but that's a bug which needs to
be fixed and once that's fixed double close on _file will be even more
likely.

The fix employed here is to not keep files inside sstable object when
writing. As soon as the writer is constructed, it's the only owner of
the file.

Fixes #1764.

Message-Id: <1482428648-22553-1-git-send-email-tgrabiec@scylladb.com>
2016-12-23 11:44:43 +02:00
Raphael S. Carvalho
fd80499b3d database: make column_family::add_sstable() private again
Signed-off-by: Raphael S. Carvalho <raphaelsc@scylladb.com>
Message-Id: <38226308bee2970a91b0e35370d6a646b85ecfe9.1482459877.git.raphaelsc@scylladb.com>
2016-12-23 11:42:16 +02:00
Paweł Dziepak
e6d27ac529 query: introduce result_memory_accounter::foreign_state
Range queries used to be performed sequentially and the shard performing
part of the read was reading state of the merger's memory accounter
directly. Now, they may be performed in parallel so it is safer to just
pass relevant data by value to the intersted shards so that they are not
reading something that another shard is modyfing at the same time.

Since query is done in parallel there is a chance of overread. However,
the parallelism is high only in sparsely populated tables and that's
when the overread is less serious problem.
2016-12-22 17:16:24 +01:00
Paweł Dziepak
49d675223e storage_proxy: fix short reads in parallel range queries
Since a1cafed370 "storage_proxy: handle
range scans of sparsely populated tables" nonsingular range queries may
be performed in parallel on multiple shards. The consequence of this
that result may be added to the merger out of order. This requires more
complex logic for handling short reads.

As soon as mutation_result_merger gets a short read it starts to discard
all subsequently received results that are known to contain partitions
with larger keys.
Then when the final result is being prepared the merger may need to
combine and sorts results which ordering is not known. If at least one
of these results is a short one all partitions with larger keys are
removed.

Due to request being performed in parallel it is possible that even
though there was a short read the merger has got enough live data to
satisfy specified limits. If this has happened the short read flag is
not set on the final result.
2016-12-22 17:16:24 +01:00
Paweł Dziepak
1a52569f7d storage_proxy: pass maximum result size to replicas
We may want to change the default individual result size limit in the
future. If it is provided by the coordinator and not hardcoded in the
replicas this can be done without causing data query digest mismatches
or wasteful mutation query results.
2016-12-22 17:16:23 +01:00
Paweł Dziepak
40176ca2f8 mutation_partition: use result limiter for digest reads
Even if we are performing a digest query we should do proper result
memory accounting so that the result ends exactly in the same place that
it would if it was a data query. This is to avoid digest mismatches
between replicas.
2016-12-22 17:16:23 +01:00
Avi Kivity
8686a59ea5 dht: use nonwrapping_ranges in ring_position_range_sharder
It was the observation that ring_position_range_sharder doesn't support
wrapping ranges that started the nonwrapping_range madness, but that
class still has some leftover wrapping ranges.  Close the circle by
removing them.
Message-Id: <20161123153113.8944-1-avi@scylladb.com>
2016-12-22 14:40:30 +01:00
Takuya ASADA
7c3b98806d dist/common/scripts/scylla_setup: improve the message of disk selection prompt
Not to confuse users, describe we only list up unmounted disks.

Fixes #1841

Signed-off-by: Takuya ASADA <syuu@scylladb.com>
Message-Id: <1479720708-6021-1-git-send-email-syuu@scylladb.com>
2016-12-22 15:36:46 +02:00
Paweł Dziepak
a7d694654a query: make result_memory_limiter constants available for linker 2016-12-22 13:35:04 +01:00
Paweł Dziepak
a0523df8d6 result_memory_limiter: add accounter for digest reads
Digest reads differ from data reads in a way that they do not really
consume any memory. We still want them to stop in the same place that
data reads would, but the per-shard semaphore shouldn't be updated by
them.
2016-12-22 13:35:04 +01:00
Paweł Dziepak
38ee69dee0 idl: allow writers to use any output stream
Original IDL generated code was hardcoded to always use bytes_ostream.
This patch makes the output stream a template parameter so that any
valid output stream can be used.
Unfortunately, making IDL writers generic requires updates in the code
that uses them, this is fixed in C++17 which would be able to deduce the
parameter in most cases.
2016-12-22 13:35:04 +01:00
Paweł Dziepak
aa083d3d85 result_memory_limiter: split new_read() to new_{data, mutation}_read()
For data queries it is very important that all replicas get limited in
the same place (this includes replicas returning only digest). That's
why they shouldn't be affected by per-shard result memory limit.
Moreover, we should make sure that individual memory limits are the
same, making the coordinator provide it for replicas which allow to
safely change it in the future.

Mutation queries are not as sensitive but it is still beneficial to make
sure that all replicas use the same individual limit.
2016-12-22 13:35:04 +01:00
Paweł Dziepak
b8e29cc99c idl: is_short_read() was added in 1.6 2016-12-22 13:35:04 +01:00
Paweł Dziepak
1c7cade559 mutation_partition: honour allowed_short_read for static rows 2016-12-22 13:35:04 +01:00
Paweł Dziepak
a7a454c388 storage_proxy: fix _is_short_read computation 2016-12-22 13:35:04 +01:00
Paweł Dziepak
8c1e4a707c storage_proxy: disallow short reads if got no live rows
If after reconciliation the coordinator ends up with no live rows and
short reads are allowed a retry may not make any progress if replicas
end their reads in the same place. The solution is to disallow short
reads on retries which are caused by final result having no live rows.
2016-12-22 13:35:04 +01:00
Paweł Dziepak
6db262446f storage_proxy: don't stop after result with no live rows
mutation_result_merger merges results from different shards and stops as
soon as a shard returned a short read or memory usage on the merging
shard is too high. However, it should never stop unless at least one
live rows is in the merged result.
2016-12-22 13:35:04 +01:00
Avi Kivity
74ecd7072a Merge "Reduce overhead of get_max_purgeable_timestamp() during compaction" from Tomasz
* 'tgrabiec/calculate-hash-once-compaction' of github.com:cloudius-systems/seastar-dev:
  sstables: Calculate key hash only once during compaction
  tests: sstables: Add more test cases to tombstone_purge_test
  db: Expose column_family::add_sstable
  tests: sstables: Ensure timestamps are increasing
  tests: sstables: Simplify tombstone_purge_test
2016-12-22 14:33:30 +02:00
Tomasz Grabiec
045b9fd7c1 sstables: Calculate key hash only once during compaction
Improves compaction performance.
2016-12-22 13:24:46 +01:00
Tomasz Grabiec
fb8765bef9 tests: sstables: Add more test cases to tombstone_purge_test 2016-12-22 13:24:46 +01:00
Tomasz Grabiec
c7ff2a2bb0 db: Expose column_family::add_sstable
Needed by compaction tests.
2016-12-22 13:24:46 +01:00
Tomasz Grabiec
d841cab02c tests: sstables: Ensure timestamps are increasing 2016-12-22 13:24:45 +01:00
Tomasz Grabiec
21ade8e4a4 tests: sstables: Simplify tombstone_purge_test
- moved to seastar thread

  - extracted sstable creation and validation logic

  - reduced code duplication

  - switched to mutation_reader assertions

  - used result of compact_sstable() to locate the new sstable

  - rather than setting gc timestamp in the past, bump the clock
    before compacting
2016-12-22 13:24:41 +01:00
Tomasz Grabiec
bc6486b304 Use gc_clock instead of db_clock where possible
Some code paths were obtaining db_clock timestamp to only convert it
to gc_clock later. Avoid this. In the future we could make gc_clock
cheaper cause it has low precision.

Message-Id: <1482401190-2035-1-git-send-email-tgrabiec@scylladb.com>
2016-12-22 13:27:55 +02:00
Raphael S. Carvalho
c26090a6b2 sstables/compress: fix error message for snappy uncompression
Signed-off-by: Raphael S. Carvalho <raphaelsc@scylladb.com>
Message-Id: <898ad07db705355bdbf780afdb3aa982b8ca3823.1482364125.git.raphaelsc@scylladb.com>
2016-12-22 09:08:34 +01:00
Raphael S. Carvalho
27fb8ec512 db: avoid excessive disk usage during sstable resharding
Shared sstables will now be resharded in the same order to guarantee
that all shards owning a sstable will agree on its deletion nearly
the same time, therefore, reducing disk space requirement.
That's done by picking which column family to reshard in UUID order,
and each individual column family will reshard its shared sstables
in generation order.

Fixes #1952.

Signed-off-by: Raphael S. Carvalho <raphaelsc@scylladb.com>
Message-Id: <87ff649ed24590c55c00cbb32bffd8fa2743e36e.1482342754.git.raphaelsc@scylladb.com>
2016-12-21 23:18:06 +02:00
Tomasz Grabiec
d87d50dc64 db: Use microsecond precision for server-side timestamps
Currently server-side timestamps use a clock with millisecond
precision. Timestamps have microsecond resolution, with lower bits
used to serialize mutations originating from given client.

Timestamps for column drops always use just the millisecond base. A
column drop which is executed after an insert may thus be given lower
timestamp than the insert, even when the two are serialized on the
client side over same connection.

Use microsecond precision to reduce chances of that event.

This is supposed to fix sporadic failures of
schema_test.py:TestSchema.drop_column_queries_test dtest.
Message-Id: <1482343119-27698-1-git-send-email-tgrabiec@scylladb.com>
2016-12-21 18:03:22 +00:00
Avi Kivity
875635554d Merge "educe overhead of partition presence checker during cache update" from Tomasz
Refs #1943.

* 'tgrabiec/optimize-bloom-filter' of github.com:cloudius-systems/seastar-dev:
  db: Compute key hash once in partition_presence_checker
  bloom_filter: Allow checking presence using pre-hashed key
  db: Use incremental selector in partition_presence_checker
2016-12-21 14:24:54 +02:00
Takuya ASADA
d356c21512 configure.py: don't allow to run multiple 'ninja -C seastar' on same time
Scylla's build.ninja allows to run multiple 'ninja -C seastar' on same time,
it breaks DPDK build after upgraded to DPDK-16.10:
https://gist.github.com/syuu1228/4bd1170630b7e5f15653281b4728e521

To prevent it, we need to limit number of seastar build only one in same time.

Note: it doesn't mean disabling parallel build on Seastar.

Signed-off-by: Takuya ASADA <syuu@scylladb.com>
Message-Id: <1482250560-20289-1-git-send-email-syuu@scylladb.com>
2016-12-21 12:42:52 +02:00
Vlad Zolotarov
62cad0f5f5 tracing: don't start tracing until a Tracing service is fully initialized
RPC messaging service is initialized before the Tracing service, so
we should prevent creation of tracing spans before the service is
fully initialized.

We will use an already existing "_down" state and extend it in a way
that !_down equals "started", where "started" is TRUE when the local
service is fully initialized.

We will also split the Tracing service initialization into two parts:
   1) Initialize the sharded object.
   2) Start the tracing service:
      - Create the I/O backend service.
      - Enable tracing.

Fixes issue #1939

Signed-off-by: Vlad Zolotarov <vladz@scylladb.com>
Message-Id: <1481836429-28478-1-git-send-email-vladz@scylladb.com>
2016-12-21 12:40:14 +02:00
Gleb Natapov
0a2dd39c75 messaging_service: move MUTATION_DONE messages to separate connection
If a node gets more MUTATION request that it can handle via RPC it will
stop reading from this RPC connection, but this will prevent it from
getting MUTATION_DONE responses for requests it coordinates because
currently MUTATION and MUTATION_DONE messages shares same connection.

To solve this problem this patches moves MUTATION_DONE messages to
separate connection.

Fixes: #1843

Message-Id: <20161201155942.GC11581@scylladb.com>
2016-12-21 11:10:15 +02:00
Piotr Jastrzebski
3e502de153 mutation_partition: don't use unique_ptr to manage LSA objects
Unique_ptr won't destruct them correctly.

Signed-off-by: Piotr Jastrzebski <piotr@scylladb.com>
Message-Id: <5b49bb25a962432a178fe75554dd010c3cdea41d.1482261888.git.piotr@scylladb.com>
2016-12-21 09:40:15 +01:00
Raphael S. Carvalho
e28537b56f sstables: fix calculation of memory footprint for summary
size of keys weren't taken into account, so value reported
via collectd is much smaller than actual footprint.

Signed-off-by: Raphael S. Carvalho <raphaelsc@scylladb.com>
Message-Id: <3ca24612e4e84d1cbdea4f2d79e431a4f4479291.1482255327.git.raphaelsc@scylladb.com>
2016-12-20 18:28:47 +00:00
Paweł Dziepak
d0e61fd092 test.py: remove '.cc' from view_schema_test 2016-12-20 18:26:52 +00:00